Known problems

Bigball AG wrappers and file I/O plugins

The bigball ag wrappers, which are built with the --enable-bigball option, won't work with file I/O plugins. It's because there are two seperate AG data spaces: one in the bigball wrapper modules, and the other one in the library linked with the file I/O modules. Thus you can load annotation files using the plugins, but you cannot access the loaded AGs through the bigball wrappers, because the loaded AGs are in a different space.

Annotation Graph Toolkit